-
Does Rhizobial Inoculation Change the Microbial Community in Field Soils? A Comparison with Agricultural Land-use Changes
Shintaro Hara, Kaori Kakizaki, Masaru Bamba, Manabu Itakura, Masayuki Sugawara, Atsuo Suzuki, Yuma Sasaki, Masanori Takeda, Kanako Tago, Tsubasa Ohbayashi, Toshihiro Aono, Luciano Nobuhiro Aoyagi, Hiroaki Shimada, Ryo Shingubara, Sachiko Masuda, Arisa Shibata, Ken Shirasu, Rota Wagai, Hiroko Akiyama, Shusei Sato, Kiwamu MinamisawaMicrobes Environ . 2024;39(3). doi: 10.1264/jsme2.ME24006 -
Growth and Yield Dynamics in Three Japanese Soybean Cultivars with Plant Growth-Promoting Pseudomonas spp. and Bradyrhizobium ottawaense Co-Inoculation
Khin Thuzar Win, Fukuyo Tanaka, Kiwamu Minamisawa, Haruko Imaizumi-AnrakuMicroorganisms. 19 July, 2024 ;12(7), 1478. doi: 10.3390/microorganisms12071478 -
地球冷却微生物を探せ―シチズンサイエンスの挑戦
大久保智司実験医学実験医学,2024年6月号 -
植物由来の有機化合物ジュグロンが硝化を抑制する分子メカニズムを世界で初めて解明
圷ゆき枝、鈴木倫太郎、西ヶ谷有輝、山崎俊正作物生産と土づくり,2024年4・5月号 -
根粒共生で機能するBradyrhizobium属根粒菌の菌体外多糖
川原田泰之土と微生物,2024 年 78 巻 1 号 p. 5-11 -
Dynamics of N₂O production and reduction processes in a soybean field revealed by isotopocule analyses
Sakae Toyoda, Fadwa Damak, Shohei Hattori, Masanori Takeda, Hiroko Akiyama, Yuma Sasaki, Kiwamu MinamisawaSoil Biology and Biochemistry. Feb 16, 2024 ;191. doi: 10.1016/j.soilbio.2024.109358 -
Uncovering plant microbiomes using long-read metagenomic sequencing
Sachiko Masuda, Pamela Gan, Yuya Kiguchi, Mizue Anda, Kazuhiro Sasaki, Arisa Shibata, Wataru Iwasaki, Wataru Suda, Ken ShirasuCommun Biol . Mar 27, 2024 ;7(1):357. doi: 10.1038/s42003-024-05998-w. -
Diurnal variation in methane emission from a rice paddy due to ebullition
Masako Kajiura, Takeshi TokidaJ Environ Qual. Mar-Apr, 2024. 53(2):265-273. doi: 10.1002/jeq2.20553. Epub 2024 Feb 28. -
市民科学で地球温暖化を抑える―N₂O消去微生物の探索
大久保智司科学,2024年2月号 pp.99-103 -
Methane and nitrous oxide emissions from agricultural fields in Japan and mitigation options: a review
Hiroko AkiyamaSoil Science and Plant Nutrition. Jun 4, 2024 ;Volume 70, 79-87. doi: 10.1080/00380768.2023.2298782 -
A novel Rhizobium sp. Chiba-1 strain exhibits the host range for nodule symbiosis in Lotus species
Yuhei Chiba, Mao Sasaki, Sachiko Masuda, Arisa Shibata, Ken Shirasu, Yasuyuki KawaharadaMicrobes Environ . Dec 1, 2023;38(4):ME23056. doi: 10.1264/jsme2.ME23056. -
Bradyrhizobium ottawaense efficiently reduces nitrous oxide through high nosZ gene expression
Sawa Wasai-Hara, Manabu Itakura, Arthur Fernandes Siqueira, Daisaku Takemoto, Masayuki Sugawara, Hisayuki Mitsui, Shusei Sato, Noritoshi Inagaki, Toshimasa Yamazaki, Haruko Imaizumi-Anraku, Yoshikazu Shimoda, Kiwamu MinamisawaSci Rep . Nov 1, 2023;13(1):18862. doi: 10.1038/s41598-023-46019-w. -
土壌メタゲノム情報から脱窒関連酵素の構造的多様性を明らかにする −脱窒制御剤の開発に向けて−
原新太郎、圷ゆき枝、鈴木倫太郎、早津雅仁、多胡香奈子土と微生物,Vol.77 No.2 pp.61-73 -
農耕地土壌における硝化による温室効果ガス一酸化二窒素(N₂O)の発生とその対策 ―硝化制御によるN₂O発生抑制剤開発の基盤構築―
大林 翼、Nobuhiro Luciano Aoyagi、山崎 俊正、多胡 香奈子、早津 雅仁土と微生物,Vol.77 No.2 pp.51-60 -
農業用微生物資材の研究開発動向のミニレビュー:ブレイクスルーに向けた13の取組み
菅野学、玉木秀幸土と微生物,Vol.77 No.2 pp.74-92 -
ダイズ根粒菌のN₂O還元能を利用したN₂O排出削減
板倉学北隆館「アグリバイオ」2023年11月号 -
Synergistic N₂-fixation and salt stress mitigation in soybean through dual inoculation of ACC deaminase-producing Pseudomonas and Bradyrhizobium
Khin Thuzar Win, Sawa Wasai-Hara, Fukuyo Tanaka, Aung Zaw Oo, Kiwamu Minamisawa, Yoshikazu Shimoda, Haruko Imaizumi-AnrakuSci Rep. 2023 Oct 10;13(1):17050. doi: 10.1038/s41598-023-43891-4. -
Rhizosphere frame system enables nondestructive live-imaging of legume-rhizobium interactions in the soil.
Hanna Nishida, Yoshikazu Shimoda, Khin Thuzar Win, Haruko Imaizumi-AnrakuJ Plant Res. Sep 2023;136(5):769-780. doi: 10.1007/s10265-023-01476-2. Epub 2023 Jul 4. -
Methylocystis iwaonis sp. nov., a type II methane-oxidizing bacterium from surface soil of a rice paddy field in Japan, and emended description of the genus Methylocystis ( ex Whittenbury et al. 1970) Bowman et al. 1993
Hirotaka Kaise, Joseph Benewindé Sawadogo, Mohammad Saiful Alam, Chihoko Ueno, Dayéri Dianou, Rina Shinjo, Susumu AsakawaInt J Syst Evol Microbiol. 2023 Jun;73(6). doi: 10.1099/ijsem.0.005925. -
市民参加型研究プロジェクト「地球冷却微生物を探せ」の現状と展望
大久保 智司、青木 裕一、戸田 聡一郎、加藤 広海化学と生物,Vol.61 No.5 pp.210-213 -
土壌由来の温室効果ガス削減に向けた市民科学による微生物探索
大久保 智司、青木 裕一土と微生物,Vol.77 No.1 pp.34-39 -
土壌微生物群集構造を支配する土壌環境の不均質性に関するミニレビュー:微生物ハビタットとしての土壌を捉えなおす
伊藤 虹児、和穎 朗太土と微生物,Vol.77 No.1 pp.18-28 -
土壌試料における総N₂O還元速度の定量
新宮原 諒、中島 泰弘、和穎 朗太土と微生物,Vol.77 No.1 pp.8-17 -
Type-specific quantification of particulate methane monooxygenase gene of methane-oxidizing bacteria at the oxic-anoxic interface of a surface paddy soil by digital PCR
Rina Shinjo, Fumika Oe, Koki Nakagawa, Jun Murase, Susumu Asakawa, Takeshi WatanabeEnviron Microbiol Rep . Apr 20, 2023. doi: 10.1111/1758-2229.13155. Online ahead of print. -
Facilitative interaction networks in experimental microbial community dynamics
Hiroaki Fujita, Masayuki Ushio, Kenta Suzuki, Masato S. Abe, Masato Yamamichi, Yusuke Okazaki, Alberto Canarini, Ibuki Hayashi, Keitaro Fukushima, Shinji Fukuda, E. Toby Kiers, and Hirokazu TojuFront. Microbiol., April 11, 2023 Sec. Systems Microbiology Volume 14 - 2023. doi.org/10.3389/fmicb.2023.1153952 -
施肥・栽培と温室効果ガス
秋山博子新植物栄養・肥料学,朝倉書店,2023年4月5日 -
Alternative stable states, nonlinear behavior, and predictability of microbiome dynamics
Hiroaki Fujita, Masayuki Ushio, Kenta Suzuki, Masato S Abe, Masato Yamamichi, Koji Iwayama, Alberto Canarini, Ibuki Hayashi, Keitaro Fukushima, Shinji Fukuda, E Toby Kiers, Hirokazu TojuMicrobiome . Mar 29, 2023;11(1):63. doi: 10.1186/s40168-023-01474-5. -
Revisiting process-based simulations of soil nitrite dynamics: Tighter cycling between nitrite and nitrate than considered previously
Jinsen Zheng, Kazumichi Fujii, Keisuke Koba, Wolfgang Wanek, Christoph Müller, Anne B. Jansen-Willems, Yasuhiro Nakajima, Rota Wagai, Alberto CanariniSoil Biology and Biochemistry Volume 178, March 2023. doi.org/10.1016/j.soilbio.2023.108958 -
Deciphering nitrous oxide emissions from tropical soils of different land uses
Jinsen Zheng, Tadashi Sakata, Sukartiningsih, and Kazumichi FujiiSci Total Environ. Mar 1, 2023 ;862:160916. doi: 10.1016/j.scitotenv.2022.160916. Epub 2022 Dec 14. -
Feature-based algorithm for large-scale rice phenology detection based on satellite images
Xin Zhao, Kazuya Nishina, Tomoko Kawaguchi Akitsu, Liguang Jiang, Yuji Masutomi, Kenlo Nishida NasaharaAgricultural and Forest Meteorology Vol 329, February 15, 2023. doi: 10.1016/j.agrformet.2022.109283 -
ダイズ根粒菌のN₂O還元活性を利用した温室効果ガス(N₂O)の削減
板倉学作物生産と土づくり,2022年 12月・2023年1月号 pp.10-15 -
Global soil metagenomics reveals ubiquitous yet previously-hidden predominance of Deltaproteobacteria in nitrogen-fixing microbiome
Yoko Masuda, Kazumori Mise, Zhenxing Xu, Zhengcheng Zhang, Yutaka Shiratori, Keishi Senoo, and Hideomi ItohPreprint. bioRxiv. doi.org/10.1101/2022.12.09.519847. -
非マメ科作物の窒素固定エンドファイト
南澤究作物生産と土づくり,2022年10•11月号 pp.21-25 -
Type III effector provides a novel symbiotic pathway in legume-rhizobia symbiosis
Safirah Tasa Nerves Ratu, Lidia Amelia, and Shin OkazakiBioscience, Biotechnology, and Biochemistry, Nov 11, 2022;87(1):28-37. doi: 10.1093/bbb/zbac178. -
Mitigation of greenhouse gas emission by nitrogen-fixing bacteria
Kiwamu MinamisawaBioscience, Biotechnology, and Biochemistry, Dec 21, 2022;87(1):7-12. doi: 10.1093/bbb/zbac177. -
A New Classification of Lysin Motif Receptor-like Kinases in Lotus Japonicus
Hafijur Ruman and Yasuyuki KawaharadaPlant and Cell Physiology, 2022 Nov 5;pcac156. doi: 10.1093/pcp/pcac156. -
Strains of Bradyrhizobium barranii sp. nov associated with legumes native to Canada are symbionts of soybeans and belong to different subspecies and symbiovars
Eden S. P. Bromfield, Sylvie Cloutier, Sawa Wasai-Hara, and Kiwamu MinamisawaInt J Syst Evol Microbiol. Oct 19, 2022;72(10). doi: 10.1099/ijsem.0.005549. -
Anaeromyxobacter oryzae sp. nov., Anaeromyxobacter diazotrophicus sp. nov. and Anaeromyxobacter paludicola sp. nov., isolated from paddy soils
Hideomi Itoh, Zhenxing Xu, Kazumori Mise, Yoko Masuda, Natsumi Ushijima, Chie Hayakawa, Yutaka Shiratori, and Keishi SenooInt J Syst Evol Microbiol, Oct 3, 2022;72(10), doi.org/10.1099/ijsem.0.005546 -
History of anthropogenic Nitrogen inputs (HaNi) to the terrestrial biosphere: 2 A 5-arcmin resolution annual dataset from 1860 to 2019
Hanqin Tian, Zihao Bian, Hao Shi, Xiaoyu Qin, Naiqing Pan, Chaoqun Lu, Shufen Pan, Francesco N. Tubiello, Jinfeng Chang, Giulia Conchedda, Junguo Liu, Nathan Mueller, Kazuya Nishina, Rongting Xu, Jia Yang, Liangzhi You, and Bowen ZhangEath System Science Data, Oct 18, 2022;14(10) ESSD, 14, 4551–4568. doi: 10.1594/PANGAEA.942069 -
Intercontinental Diversity of Caballeronia Gut Symbionts in the Conifer Pest Bug Leptoglossus occidentalis
Tsubasa Ohbayashi, Raynald Cossard, Gaëlle Lextrait, Takahiro Hosokawa, Vincent Lesieur, Kazutaka Takeshita, Kanako Tago, Peter Mergaert, and Yoshitomo KikuchiMicrobes and Environments, Aug 1, 2022;37(3), ME22042 doi:10.1264/jsme2.ME22042 -
Effects of source sample amount on biodiversity surveys of bacteria, fungi, and nematodes in soil ecosystems
Takuya Kageyama and Hirokazu TojuFrontiers in Ecology and Evolution, Sep 13, 2022 doi: 10.3389/fevo.2022.959945 -
Fillable and Unfillable Gaps in Plant Transcriptome under Field and Controlled Environments
Yoichi Hashida, Ayumi Tezuka, Yasuyuki Nomura, Mari Kamitani, Makoto Kashima, Yuko Kurita, and Atsushi J NaganoPlant Cell & Environment, 2022 Aug;45(8):2410-2427. doi: 10.1111/pce.14367. Epub 2022 Jun 21. -
DeLTa-Seq: direct-lysate targeted RNA-Seq from crude tissue lysate
Makoto Kashima, Mari Kamitani, Yasuyuki Nomura, Natsumi Mori-Moriyama, Shigeyuki Betsuyaku, Hiromi Hirata, and Atsushi J. NaganoPlant Methods . Aug 6 ,2022;18(1):99. doi: 10.1186/s13007-022-00930-x -
水田から排出される温室効果ガス―メタンを削減するための育種的,栽培的アプローチ―
常田岳志農業,No.1693 pp37-43. -
温室効果ガス削減と土壌微生物学
南澤究土と微生物 76(2): 36-42,doi: 10.18946/jssm.76.2_36 -
In vivo evidence of single 13C and 15N isotope-labeled methanotrophic nitrogen-fixing bacterial cells in rice roots.
Shintaro Hara, Naohisa Wada, Sliver Sung-Yun Hsiao, Meng Zhang, Zhihua Bao, Yoshiyuki Iizuka, Der-Chuen Lee, Shusei Sato, Sen-Lin Tang, and Kiwamu MinamisawamBio, May 24, 2022;13(3), e0125522. doi: 10.1128/mbio.01255-22. -
Fillable and unfillable gaps in plant transcriptome under field and controlled environments
Yoichi Hashida, Ayumi Tezuka, Yasuyuki Nomura, Mari Kamitani, Makoto Kashima, Yuko Kurita, and Atsushi J. NaganoPlant Cell & Environment, May 24, 2022 doi: 10.1111/pce.14367 -
窒素循環を担う植物共生微生物
南澤究土と微生物 76(1): 4-11,日本農学賞受賞論文,doi: 10.18946/jssm.76.1_4 -
N₂O削減根粒菌の利用技術
南澤究カーボンニュートラル2050アウトルック(日本電気協会新聞部) p.284-288 -
農耕地・畜産の温室効果ガス排出削減
秋山博子カーボンニュートラル2050アウトルック(日本電気協会新聞部) p.280-283 -
土壌団粒構造中における微生物の棲み分けに関する科学的知見
伊藤虹児、和穎朗太日本農薬学会誌 (和文誌), 2022年 47巻 1号 p. 5-7, doi: 15.1584/jpestics.W22-08 -
Root-specific CLE3 expression is required for WRKY33activation in Arabidopsis shoots
Dichao Ma, Satoshi Endo, Eriko Betsuyaku, Toru Fujiwara, Shigeyuki Betsuyaku, and Hiroo FukudaPlant Mol Biol, 2022 Feb;108(3):225-239. doi: 10.1007/s11103-021-01234-9. Epub 2022 Jan 17. -
Overview of recent nitrifying microbial research
Masahito Hayatsu, Chie Katsuyama, and Kanako TagoSoil Science and Plant Nutrition, Volume 67, 2021 - Issue 6,619-632. doi: 10.1080/00380768.2021.1981119 -
Appropriate chamber deployment time for separate quantification of CH₄ emissions via plant and ebullition from rice paddies using a modified closed-chamber method
Masako Kajiura and Takeshi TokidaJournal of Agricultural Meteorology, 2022, 78(1), 41-45. doi: 10.2480/agrmet.D-21-00033. -
Quantifying bubbling emission (ebullition) of methane from a rice paddy using high-time-resolution concentration data obtained during a closed-chamber measurement
Masako Kajiura and Takeshi TokidaJournal of Agricultural Meteorology, 2021, 77(4): 245-252. doi: 10.2480/agrmet.D-21-00022. -
Synergistic and Offset Effects of Fungal Species Combinations on Plant Performance
Yoshie Hori, Hiroaki Fujita, Kei Hiruma, Kazuhiko Narisawa, and Hirokazu TojuFront Microbiol, Sep 13, 2021,12:713180. doi: 10.3389/fmicb.2021.713180. -
Undervalued Pseudo-nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers
Kazumori Mise, Yoko Masuda, Keishi Senoo, and Hideomi ItohmSphere, Nov 17, 2021, e0078521. doi: 10.1128/msphere.00785-21. -
Quantification of global and national nitrogen budgets for crop production
Xin Zhang, Tan Zou, Luis Lassaletta, Nathaniel D. Mueller, Francesco N. Tubiello, Matthew D. Lisk, Chaoqun Lu, Richard T. Conant, Christopher D. Dorich, James Gerber, Hanqin Tian, Tom Bruulsema, Tai McClellan Maaz, Kazuya Nishina, Benjamin Leon Bodirsky, Alexander Popp, Lex Bouwman, Arthur Beusen, Jinfeng Chang, Petr Havlík, David Leclère, Josep G. Canadell, Robert B. Jackson, Patrick Heffer, Nathan Wanner, Weifeng Zhang, and Eric A. DavidsonNature Food, 2021, 2, 529–540. doi: 10.1038/s43016-021-00318-5. -
Multiple Domains in the Rhizobial Type III Effector Bel2-5 Determine Symbiotic Efficiency With Soybean
Safirah Tasa Nerves Ratu, Atsushi Hirata, Christian Oliver Kalaw, Michiko Yasuda, Mitsuaki Tabuchi and Shin OkazakiFront Plant Sci, 2021 Jun 7;12:689064. doi: 10.3389/fpls.2021.689064. -
Evolution of rhizobial symbiosis islands through insertion sequence-mediated deletion and duplication
Haruka Arashida, Haruka Odake, Masayuki Sugawara, Ryota Noda, Kaori Kakizaki, Satoshi Ohkubo, Hisayuki Mitsui, Shusei Sato, and Kiwamu Minamisawa(Corresponding author)ISME J, Jul 16, 2021. doi: 10.1038/s41396-021-01035-4. -
第1回国際シンポジウム「農業における土壌微生物を活用したクールアース」の開催報告
板倉学日本土壌肥料学会誌 2021, 92(3) -
土壌・植物微生物叢の中で行われるマメ科植物の根粒共生
川原田 泰之月刊誌アグリバイオ(北隆舘)2021年1月号