論文 | dSOILプロジェクト

Unipolar polysaccharide-mediated attachment of the N₂O-reducing bacterium Bradyrhizobium ottawaense SG09 to plant roots

Y Takeguchi, R Shibuya, M Kondo, E Betsuyaku, M Itakura, K Minamisawa, M Sugawara, S Betsuyaku

Preprint. bioRxiv. doi.org/10.1101/2025.06.05.658015
Fusarium Fungi Produce Nitrous Oxide (N₂O) from Nitrite (NO2-) in a Model Pot System Simulating the Soybean Rhizosphere

Moriuchi M, Kuzunuki K, Ikenishi F, Sameshima R, Nakagiri A, Toyoda S, Katsuyama C, Kakizaki K, Itakura M, Yoshida N, Suwa Y, Minamisawa K

Microbes Environ. 2025;40(2). doi: 10.1264/jsme2.ME24092. PMID: 40307009.
The genomic landscape of gene-level structural variations in Japanese and global soybean Glycine max cultivars

Yano R, Li F, Hiraga S, Takeshima R, Kobayashi M, Toda K, Umehara Y, Kajiya-Kanegae H, Iwata H, Kaga A, Ishimoto M

Nat Genet . 2025 ;57(4):973-985. doi: 10.1038/s41588-025-02113-5.
Mitigating nitrous oxide emission by a down-flow hanging sponge bioprocess enabling the removal of high concentration N₂O

R Maeda, M Sato, K Minamisawa, K Kubota

Chemical Engineering Journal, 2025;513,162885. doi.org/10.1016/j.cej.2025.162885.
Mitigating Global Warming in Agriculture: Recent Highlights on Cooling the Earth by Soil Microorganisms

Yong Guo, Hiroyuki Ohta, Tomoyasu Nishizawa

土と微生物 2025;79(1) pp.10-18
Single-cell genomics of single soil aggregates: methodological assessment and potential implications with a focus on nitrogen metabolism

Matsumura E, Kato H, Hara S, Ohbayashi T, Ito K, Shingubara R, Kawakami T, Mitsunobu S, Saeki T, Tsuda S, Minamisawa K, Wagai R.

Front Microbiol. 2025;16:1557188. doi: 10.3389/fmicb.2025.1557188.
Betaproteobacterial clade II nosZ activated under high N₂O concentrations in paddy soil microcosms

Mise K, Masuda Y, Senoo K, Itoh H.

J Appl Microbiol. 2025;136(3):lxaf055. doi: 10.1093/jambio/lxaf055.
First Microscale Data on Depth Profiles of Microbial N₂O Reduction, O2 Availability, and Pore Networks Inside Contrasting Single Soil Aggregates

S. Mitsunobu, R. Wagai, H. Shimada, H. Kato, K. Ito, S. Sato, M. Hayatsu, K. Minamisawa

Soil Biol. Biochem. 2024,109684. doi: 10.1016/j.soilbio.2024.109684
根粒菌による温室効果ガス（N₂O）の削減技術の現在 -N₂O還元根粒菌の新たな可能性を探る-

原沙和、板倉学

土と微生物 2024;78(2) pp.46-54
Mitigating nitrous oxide emission by an ultra-fast bioprocess enabling the removal of high concentration N₂O

R. Maeda, M. Sato, K. Minamisawa, K. Kubota

bioRxiv. 2024. doi: 10.1101/2024.10.08.615939
Does Rhizobial Inoculation Change the Microbial Community in Field Soils? A‍ ‍Comparison with Agricultural Land-use Changes

Hara S, Kakizaki K, Bamba M, Itakura M, Sugawara M, Suzuki A, Sasaki Y, Takeda M, Tago K, Ohbayashi T, Aono T, Aoyagi LN, Shimada H, Shingubara R, Masuda S, Shibata A, Shirasu K, Wagai R, Akiyama H, Sato S, Minamisawa K. 2024. Microbes Environ. 39(3):ME24006. doi: 10.1264/jsme2.ME24006.
Growth and Yield Dynamics in Three Japanese Soybean Cultivars with Plant Growth-Promoting Pseudomonas spp. and Bradyrhizobium ottawaense Co-Inoculation

Win KT, Tanaka F, Minamisawa K, Imaizumi-Anraku H. 2024. Microorganisms. 12(7):1478. doi:10.3390/microorganisms12071478
植物由来の有機化合物ジュグロンが硝化を抑制する分子メカニズムを世界で初めて解明

圷ゆき枝、鈴木倫太郎、西ヶ谷有輝、山崎俊正　作物生産と土づくり，2024年4・5月号
地球冷却微生物を探せ―シチズンサイエンスの挑戦

大久保智司　実験医学実験医学，2024年6月号
Global soil metagenomics reveals distribution and predominance of Deltaproteobacteria in nitrogen-fixing microbiome.

Masuda Y, Mise K, Xu Z, Zhang Z, Shiratori Y, Senoo K, Itoh H.

Microbiome. 2024 May 24;12(1):95. doi: 10.1186/s40168-024-01812-1.
根粒共生で機能するBradyrhizobium属根粒菌の菌体外多糖

川原田泰之　土と微生物，2024 年 78 巻 1 号 p. 5-11
Dynamics of N₂O production and reduction processes in a soybean field revealed by isotopocule analyses

Toyoda S, Damak F, Hattori S, Takeda M, Akiyama H, Sasaki Y, Minamisawa K. 2024. Soil Biol. Biochem. 191. doi: 10.1016/j.soilbio.2024.109358
Uncovering plant microbiomes using long-read metagenomic sequencing

Masuda S, Gan P, Kiguchi Y, Anda M, Sasaki K, Shibata A, Iwasaki W, Suda W, Shirasu K. 2024. Commun Biol. 7(1):357. doi: 10.1038/s42003-024-05998-w.
Diurnal variation in methane emission from a rice paddy due to ebullition

Kajiura M, Tokida T. 2024. J Environ Qual. 2024 Mar-Apr;53(2):265-273. doi: 10.1002/jeq2.20553.
市民科学で地球温暖化を抑える―N₂O消去微生物の探索

大久保智司　科学2024年2月号 pp.99-103
Methane and nitrous oxide emissions from agricultural fields in Japan and mitigation options: a review

Akiyama H. 2024. Soil Sci. Plant Nutr. Vol70, 79-87. doi: 10.1080/00380768.2023.2298782
A novel Rhizobium sp. Chiba-1 strain exhibits the host range for nodule symbiosis in Lotus species

Chiba Y, Sasaki M, Masuda S, Shibata A, Shirasu K, Kawaharada Y. 2023. Microbes Environ. 38(4):ME23056. doi: 10.1264/jsme2.ME23056.
農業用微生物資材の研究開発動向のミニレビュー：ブレイクスルーに向けた13の取組み

菅野学、玉木秀幸. 土と微生物，Vol.77 No.2 pp.74-92
農耕地土壌における硝化による温室効果ガス一酸化二窒素(N₂O)の発生とその対策 ―硝化制御によるN₂O発生抑制剤開発の基盤構築―

大林翼、Nobuhiro Luciano Aoyagi、山崎俊正、多胡香奈子、早津雅仁. 土と微生物，Vol.77 No.2 pp.51-60
土壌メタゲノム情報から脱窒関連酵素の構造的多様性を明らかにする −脱窒制御剤の開発に向けて−

原新太郎、圷ゆき枝、鈴木倫太郎、早津雅仁、多胡香奈子. 土と微生物，Vol.77 No.2 pp.61-73
Bradyrhizobium ottawaense efficiently reduces nitrous oxide through high nosZ gene expression

Wasai-Hara S, Itakura M, Fernandes Siqueira A, Takemoto D, Sugawara M, Mitsui H, Sato S, Inagaki N, Yamazaki T, Imaizumi-Anraku H, Shimoda Y, Minamisawa K. 2023. Sci Rep. 13(1):18862. doi: 10.1038/s41598-023-46019-w.
ダイズ根粒菌のN₂O還元能を利用したN₂O排出削減

板倉学. 北隆館「アグリバイオ」2023年11月号
Synergistic N₂-fixation and salt stress mitigation in soybean through dual inoculation of ACC deaminase-producing Pseudomonas and Bradyrhizobium

Win KT, Wasai-Hara S, Tanaka F, Oo AZ, Minamisawa K, Shimoda Y, Imaizumi-Anraku H. 2023. Sci Rep. 13(1):17050. doi: 10.1038/s41598-023-43891-4.
Rhizosphere frame system enables nondestructive live-imaging of legume-rhizobium interactions in the soil.

Nishida H, Shimoda Y, Win KT, Imaizumi-Anraku H. 2023. J Plant Res. 136(5):769-780. doi: 10.1007/s10265-023-01476-2.
Methylocystis iwaonis sp. nov., a type II methane-oxidizing bacterium from surface soil of a rice paddy field in Japan, and emended description of the genus Methylocystis ( ex Whittenbury et al. 1970) Bowman et al. 1993

Kaise H, Sawadogo JB, Alam MS, Ueno C, Dianou D, Shinjo R, Asakawa S. 2023. Int J Syst Evol Microbiol. 73(6). doi: 10.1099/ijsem.0.005925.
市民参加型研究プロジェクト「地球冷却微生物を探せ」の現状と展望

大久保智司、青木裕一、戸田聡一郎、加藤広海. 化学と生物，Vol.61 No.5 pp.210-213
土壌試料における総N₂O還元速度の定量

新宮原諒、中島泰弘、和穎朗太

土と微生物，Vol.77 No.1 pp.8-17
土壌微生物群集構造を支配する土壌環境の不均質性に関するミニレビュー：微生物ハビタットとしての土壌を捉えなおす

伊藤虹児、和穎朗太. 土と微生物，Vol.77 No.1 pp.18-28
土壌由来の温室効果ガス削減に向けた市民科学による微生物探索

大久保智司、青木裕一. 土と微生物，Vol.77 No.1 pp.34-39
Type-specific quantification of particulate methane monooxygenase gene of methane-oxidizing bacteria at the oxic-anoxic interface of a surface paddy soil by digital PCR

Rina Shinjo, Fumika Oe, Koki Nakagawa, Jun Murase, Susumu Asakawa, Takeshi Watanabe

Environ Microbiol Rep . Apr 20, 2023. doi: 10.1111/1758-2229.13155. Online ahead of print.
Facilitative interaction networks in experimental microbial community dynamics

Hiroaki Fujita, Masayuki Ushio, Kenta Suzuki, Masato S. Abe, Masato Yamamichi, Yusuke Okazaki, Alberto Canarini, Ibuki Hayashi, Keitaro Fukushima, Shinji Fukuda, E. Toby Kiers, and Hirokazu Toju

Front. Microbiol., April 11, 2023 Sec. Systems Microbiology Volume 14 - 2023. doi.org/10.3389/fmicb.2023.1153952
施肥・栽培と温室効果ガス

秋山博子

新植物栄養・肥料学，朝倉書店，2023年4月5日
Alternative stable states, nonlinear behavior, and predictability of microbiome dynamics

Hiroaki Fujita, Masayuki Ushio, Kenta Suzuki, Masato S Abe, Masato Yamamichi, Koji Iwayama, Alberto Canarini, Ibuki Hayashi, Keitaro Fukushima, Shinji Fukuda, E Toby Kiers, Hirokazu Toju

Microbiome . Mar 29, 2023;11(1):63. doi: 10.1186/s40168-023-01474-5.
Revisiting process-based simulations of soil nitrite dynamics: Tighter cycling between nitrite and nitrate than considered previously

Jinsen Zheng, Kazumichi Fujii, Keisuke Koba, Wolfgang Wanek, Christoph Müller, Anne B. Jansen-Willems, Yasuhiro Nakajima, Rota Wagai, Alberto Canarini

Soil Biology and Biochemistry Volume 178, March 2023. doi.org/10.1016/j.soilbio.2023.108958
Deciphering nitrous oxide emissions from tropical soils of different land uses

Jinsen Zheng, Tadashi Sakata, Sukartiningsih, and Kazumichi Fujii

Sci Total Environ. Mar 1, 2023 ;862:160916. doi: 10.1016/j.scitotenv.2022.160916. Epub 2022 Dec 14.
Feature-based algorithm for large-scale rice phenology detection based on satellite images

Xin Zhao, Kazuya Nishina, Tomoko Kawaguchi Akitsu, Liguang Jiang, Yuji Masutomi, Kenlo Nishida Nasahara

Agricultural and Forest Meteorology Vol 329, February 15, 2023. doi: 10.1016/j.agrformet.2022.109283
ダイズ根粒菌のN₂O還元活性を利用した温室効果ガス（N₂O）の削減

板倉学

作物生産と土づくり，2022年 12月・2023年1月号 pp.10-15
非マメ科作物の窒素固定エンドファイト

南澤究

作物生産と土づくり，2022年10•11月号 pp.21-25
Type III effector provides a novel symbiotic pathway in legume-rhizobia symbiosis

Safirah Tasa Nerves Ratu, Lidia Amelia, and Shin Okazaki

Bioscience, Biotechnology, and Biochemistry, Nov 11, 2022;87(1):28-37. doi: 10.1093/bbb/zbac178.
Mitigation of greenhouse gas emission by nitrogen-fixing bacteria

Kiwamu Minamisawa

Bioscience, Biotechnology, and Biochemistry, Dec 21, 2022;87(1):7-12. doi: 10.1093/bbb/zbac177.
A New Classification of Lysin Motif Receptor-like Kinases in Lotus Japonicus

Hafijur Ruman and Yasuyuki Kawaharada

Plant and Cell Physiology, 2022 Nov 5;pcac156. doi: 10.1093/pcp/pcac156.
Strains of Bradyrhizobium barranii sp. nov associated with legumes native to Canada are symbionts of soybeans and belong to different subspecies and symbiovars

Eden S. P. Bromfield, Sylvie Cloutier, Sawa Wasai-Hara, and Kiwamu Minamisawa

Int J Syst Evol Microbiol. Oct 19, 2022;72(10). doi: 10.1099/ijsem.0.005549.
History of anthropogenic Nitrogen inputs (HaNi) to the terrestrial biosphere: 2 A 5-arcmin resolution annual dataset from 1860 to 2019

Hanqin Tian, Zihao Bian, Hao Shi, Xiaoyu Qin, Naiqing Pan, Chaoqun Lu, Shufen Pan, Francesco N. Tubiello, Jinfeng Chang, Giulia Conchedda, Junguo Liu, Nathan Mueller, Kazuya Nishina, Rongting Xu, Jia Yang, Liangzhi You, and Bowen Zhang

Eath System Science Data, Oct 18, 2022;14(10) ESSD, 14, 4551–4568. doi: 10.1594/PANGAEA.942069 　　
Anaeromyxobacter oryzae sp. nov., Anaeromyxobacter diazotrophicus sp. nov. and Anaeromyxobacter paludicola sp. nov., isolated from paddy soils

Hideomi Itoh, Zhenxing Xu, Kazumori Mise, Yoko Masuda, Natsumi Ushijima, Chie Hayakawa, Yutaka Shiratori, and Keishi Senoo

Int J Syst Evol Microbiol, Oct 3, 2022;72(10), doi.org/10.1099/ijsem.0.005546
Intercontinental Diversity of Caballeronia Gut Symbionts in the Conifer Pest Bug Leptoglossus occidentalis

Tsubasa Ohbayashi, Raynald Cossard, Gaëlle Lextrait, Takahiro Hosokawa, Vincent Lesieur, Kazutaka Takeshita, Kanako Tago, Peter Mergaert, and Yoshitomo Kikuchi

Microbes and Environments, Aug 1, 2022;37(3), ME22042 doi:10.1264/jsme2.ME22042
Effects of source sample amount on biodiversity surveys of bacteria, fungi, and nematodes in soil ecosystems

Takuya Kageyama and Hirokazu Toju

Frontiers in Ecology and Evolution, Sep 13, 2022 doi: 10.3389/fevo.2022.959945
Fillable and Unfillable Gaps in Plant Transcriptome under Field and Controlled Environments

Yoichi Hashida, Ayumi Tezuka, Yasuyuki Nomura, Mari Kamitani, Makoto Kashima, Yuko Kurita, and Atsushi J Nagano

Plant Cell & Environment, 2022 Aug;45(8):2410-2427. doi: 10.1111/pce.14367. Epub 2022 Jun 21.
DeLTa-Seq: direct-lysate targeted RNA-Seq from crude tissue lysate

Makoto Kashima, Mari Kamitani, Yasuyuki Nomura, Natsumi Mori-Moriyama, Shigeyuki Betsuyaku, Hiromi Hirata, and Atsushi J. Nagano

Plant Methods . Aug 6 ,2022;18(1):99. doi: 10.1186/s13007-022-00930-x
水田から排出される温室効果ガス―メタンを削減するための育種的，栽培的アプローチ―

常田岳志

農業，No.1693 pp37-43.
温室効果ガス削減と土壌微生物学

南澤究

土と微生物 76(2): 36-42，doi: 10.18946/jssm.76.2_36
In vivo evidence of single 13C and 15N isotope-labeled methanotrophic nitrogen-fixing bacterial cells in rice roots.

Shintaro Hara, Naohisa Wada, Sliver Sung-Yun Hsiao, Meng Zhang, Zhihua Bao, Yoshiyuki Iizuka, Der-Chuen Lee, Shusei Sato, Sen-Lin Tang, and Kiwamu Minamisawa

mBio, May 24, 2022;13(3), e0125522. doi: 10.1128/mbio.01255-22.
Fillable and unfillable gaps in plant transcriptome under field and controlled environments

Yoichi Hashida, Ayumi Tezuka, Yasuyuki Nomura, Mari Kamitani, Makoto Kashima, Yuko Kurita, and Atsushi J. Nagano

Plant Cell & Environment, May 24, 2022 doi: 10.1111/pce.14367
窒素循環を担う植物共生微生物

南澤究

土と微生物 76(1): 4-11，日本農学賞受賞論文，doi: 10.18946/jssm.76.1_4
N₂O削減根粒菌の利用技術

南澤究

カーボンニュートラル2050アウトルック(日本電気協会新聞部) p.284－288
農耕地・畜産の温室効果ガス排出削減

秋山博子

カーボンニュートラル2050アウトルック(日本電気協会新聞部) p.280－283
土壌団粒構造中における微生物の棲み分けに関する科学的知見

伊藤虹児、和穎朗太

日本農薬学会誌 (和文誌), 2022年 47巻 1号 p. 5-7, doi: 15.1584/jpestics.W22-08
Overview of recent nitrifying microbial research

Masahito Hayatsu, Chie Katsuyama, and Kanako Tago

Soil Science and Plant Nutrition, Volume 67, 2021 - Issue 6,619-632. doi: 10.1080/00380768.2021.1981119
Root-specific CLE3 expression is required for WRKY33activation in Arabidopsis shoots

Dichao Ma, Satoshi Endo, Eriko Betsuyaku, Toru Fujiwara, Shigeyuki Betsuyaku, and Hiroo Fukuda

Plant Mol Biol, 2022 Feb;108(3):225-239. doi: 10.1007/s11103-021-01234-9. Epub 2022 Jan 17.
Quantifying bubbling emission (ebullition) of methane from a rice paddy using high-time-resolution concentration data obtained during a closed-chamber measurement

Masako Kajiura and Takeshi Tokida

Journal of Agricultural Meteorology, 2021, 77(4): 245-252. doi: 10.2480/agrmet.D-21-00022.
Appropriate chamber deployment time for separate quantification of CH₄ emissions via plant and ebullition from rice paddies using a modified closed-chamber method

Masako Kajiura and Takeshi Tokida

Journal of Agricultural Meteorology, 2022, 78(1), 41-45. doi: 10.2480/agrmet.D-21-00033.
Synergistic and Offset Effects of Fungal Species Combinations on Plant Performance

Yoshie Hori, Hiroaki Fujita, Kei Hiruma, Kazuhiko Narisawa, and Hirokazu Toju

Front Microbiol, Sep 13, 2021,12:713180. doi: 10.3389/fmicb.2021.713180.
Undervalued Pseudo-nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers

Kazumori Mise, Yoko Masuda, Keishi Senoo, and Hideomi Itoh

mSphere, Nov 17, 2021, e0078521. doi: 10.1128/msphere.00785-21.
Quantification of global and national nitrogen budgets for crop production

Xin Zhang, Tan Zou, Luis Lassaletta, Nathaniel D. Mueller, Francesco N. Tubiello, Matthew D. Lisk, Chaoqun Lu, Richard T. Conant, Christopher D. Dorich, James Gerber, Hanqin Tian, Tom Bruulsema, Tai McClellan Maaz, Kazuya Nishina, Benjamin Leon Bodirsky, Alexander Popp, Lex Bouwman, Arthur Beusen, Jinfeng Chang, Petr Havlík, David Leclère, Josep G. Canadell, Robert B. Jackson, Patrick Heffer, Nathan Wanner, Weifeng Zhang, and Eric A. Davidson

Nat Food . 2021 Jul;2(7):529-540. doi: 10.1038/s43016-021-00318-5. Epub 2021 Jul 15.
Multiple Domains in the Rhizobial Type III Effector Bel2-5 Determine Symbiotic Efficiency With Soybean

Safirah Tasa Nerves Ratu, Atsushi Hirata, Christian Oliver Kalaw, Michiko Yasuda, Mitsuaki Tabuchi and Shin Okazaki

Front Plant Sci, 2021 Jun 7;12:689064. doi: 10.3389/fpls.2021.689064.
Evolution of rhizobial symbiosis islands through insertion sequence-mediated deletion and duplication

Arashida H, Odake H, Sugawara M, Noda R, Kakizaki K, Ohkubo S, Mitsui H, Sato S, Minamisawa K. 2022. Evolution of rhizobial symbiosis islands through insertion sequence-mediated deletion and duplication. ISME J.16(1):112-121.

doi: 10.1038/s41396-021-01035-4.
第１回国際シンポジウム「農業における土壌微生物を活用したクールアース」の開催報告

板倉学

日本土壌肥料学会誌 2021, 92(3)
土壌・植物微生物叢の中で行われるマメ科植物の根粒共生

川原田泰之

月刊誌アグリバイオ（北隆舘）2021年1月号

Unipolar polysaccharide-mediated attachment of the N₂O-reducing bacterium Bradyrhizobium ottawaense SG09 to plant roots

Fusarium Fungi Produce Nitrous Oxide (N₂O) from Nitrite (NO2-) in a Model Pot System Simulating the Soybean Rhizosphere

The genomic landscape of gene-level structural variations in Japanese and global soybean Glycine max cultivars

Mitigating nitrous oxide emission by a down-flow hanging sponge bioprocess enabling the removal of high concentration N₂O

Mitigating Global Warming in Agriculture: Recent Highlights on Cooling the Earth by Soil Microorganisms

Single-cell genomics of single soil aggregates: methodological assessment and potential implications with a focus on nitrogen metabolism

Betaproteobacterial clade II nosZ activated under high N₂O concentrations in paddy soil microcosms

First Microscale Data on Depth Profiles of Microbial N₂O Reduction, O2 Availability, and Pore Networks Inside Contrasting Single Soil Aggregates

根粒菌による温室効果ガス（N₂O）の削減技術の現在 -N₂O還元根粒菌の新たな可能性を探る-

Mitigating nitrous oxide emission by an ultra-fast bioprocess enabling the removal of high concentration N₂O

Does Rhizobial Inoculation Change the Microbial Community in Field Soils? A‍ ‍Comparison with Agricultural Land-use Changes

Growth and Yield Dynamics in Three Japanese Soybean Cultivars with Plant Growth-Promoting Pseudomonas spp. and Bradyrhizobium ottawaense Co-Inoculation

植物由来の有機化合物ジュグロンが硝化を抑制する分子メカニズムを世界で初めて解明

地球冷却微生物を探せ―シチズンサイエンスの挑戦

Global soil metagenomics reveals distribution and predominance of Deltaproteobacteria in nitrogen-fixing microbiome.

根粒共生で機能するBradyrhizobium属根粒菌の菌体外多糖

Dynamics of N₂O production and reduction processes in a soybean field revealed by isotopocule analyses

Uncovering plant microbiomes using long-read metagenomic sequencing

Diurnal variation in methane emission from a rice paddy due to ebullition

市民科学で地球温暖化を抑える―N₂O消去微生物の探索

Methane and nitrous oxide emissions from agricultural fields in Japan and mitigation options: a review

A novel Rhizobium sp. Chiba-1 strain exhibits the host range for nodule symbiosis in Lotus species

農業用微生物資材の研究開発動向のミニレビュー：ブレイクスルーに向けた13の取組み

農耕地土壌における硝化による温室効果ガス一酸化二窒素(N₂O)の発生とその対策 ―硝化制御によるN₂O発生抑制剤開発の基盤構築―

土壌メタゲノム情報から脱窒関連酵素の構造的多様性を明らかにする −脱窒制御剤の開発に向けて−

Bradyrhizobium ottawaense efficiently reduces nitrous oxide through high nosZ gene expression

ダイズ根粒菌のN₂O還元能を利用したN₂O排出削減

Synergistic N₂-fixation and salt stress mitigation in soybean through dual inoculation of ACC deaminase-producing Pseudomonas and Bradyrhizobium

Rhizosphere frame system enables nondestructive live-imaging of legume-rhizobium interactions in the soil.

Methylocystis iwaonis sp. nov., a type II methane-oxidizing bacterium from surface soil of a rice paddy field in Japan, and emended description of the genus Methylocystis ( ex Whittenbury et al. 1970) Bowman et al. 1993

市民参加型研究プロジェクト「地球冷却微生物を探せ」の現状と展望

土壌試料における総N₂O還元速度の定量

土壌微生物群集構造を支配する土壌環境の不均質性に関するミニレビュー：微生物ハビタットとしての土壌を捉えなおす

土壌由来の温室効果ガス削減に向けた市民科学による微生物探索

Type-specific quantification of particulate methane monooxygenase gene of methane-oxidizing bacteria at the oxic-anoxic interface of a surface paddy soil by digital PCR

Facilitative interaction networks in experimental microbial community dynamics

施肥・栽培と温室効果ガス

Alternative stable states, nonlinear behavior, and predictability of microbiome dynamics

Revisiting process-based simulations of soil nitrite dynamics: Tighter cycling between nitrite and nitrate than considered previously

Deciphering nitrous oxide emissions from tropical soils of different land uses

Feature-based algorithm for large-scale rice phenology detection based on satellite images

ダイズ根粒菌のN₂O還元活性を利用した温室効果ガス（N₂O）の削減

非マメ科作物の窒素固定エンドファイト

Type III effector provides a novel symbiotic pathway in legume-rhizobia symbiosis

Mitigation of greenhouse gas emission by nitrogen-fixing bacteria

A New Classification of Lysin Motif Receptor-like Kinases in Lotus Japonicus

Strains of Bradyrhizobium barranii sp. nov associated with legumes native to Canada are symbionts of soybeans and belong to different subspecies and symbiovars

History of anthropogenic Nitrogen inputs (HaNi) to the terrestrial biosphere: 2 A 5-arcmin resolution annual dataset from 1860 to 2019

Anaeromyxobacter oryzae sp. nov., Anaeromyxobacter diazotrophicus sp. nov. and Anaeromyxobacter paludicola sp. nov., isolated from paddy soils

Intercontinental Diversity of Caballeronia Gut Symbionts in the Conifer Pest Bug Leptoglossus occidentalis

Effects of source sample amount on biodiversity surveys of bacteria, fungi, and nematodes in soil ecosystems

Fillable and Unfillable Gaps in Plant Transcriptome under Field and Controlled Environments

DeLTa-Seq: direct-lysate targeted RNA-Seq from crude tissue lysate

水田から排出される温室効果ガス―メタンを削減するための育種的，栽培的アプローチ―

温室効果ガス削減と土壌微生物学

In vivo evidence of single 13C and 15N isotope-labeled methanotrophic nitrogen-fixing bacterial cells in rice roots.

Fillable and unfillable gaps in plant transcriptome under field and controlled environments

窒素循環を担う植物共生微生物

N₂O削減根粒菌の利用技術

農耕地・畜産の温室効果ガス排出削減

土壌団粒構造中における微生物の棲み分けに関する科学的知見

Overview of recent nitrifying microbial research

Root-specific CLE3 expression is required for WRKY33activation in Arabidopsis shoots

Quantifying bubbling emission (ebullition) of methane from a rice paddy using high-time-resolution concentration data obtained during a closed-chamber measurement

Appropriate chamber deployment time for separate quantification of CH₄ emissions via plant and ebullition from rice paddies using a modified closed-chamber method

Synergistic and Offset Effects of Fungal Species Combinations on Plant Performance

Undervalued Pseudo-nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers

Quantification of global and national nitrogen budgets for crop production

Multiple Domains in the Rhizobial Type III Effector Bel2-5 Determine Symbiotic Efficiency With Soybean

Evolution of rhizobial symbiosis islands through insertion sequence-mediated deletion and duplication

第１回国際シンポジウム「農業における土壌微生物を活用したクールアース」の開催報告

土壌・植物微生物叢の中で行われるマメ科植物の根粒共生